An R Interface to SciDB


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Documentation for package ‘scidb’ version 1.2-0

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A B C D E F G H I K L M N O P Q R S T U V X misc

scidb-package SciDB interface package.

-- A --

abs-method Class '"scidb"'
abs-method Class '"scidbdf"'
acos-method Class '"scidb"'
acos-method Class '"scidbdf"'
aggregate Methods for Function 'aggregate' in Package 'scidb'
aggregate-method Methods for Function 'aggregate' in Package 'scidb'
all.equal.scidb Test if two SciDB arrays are equal in content
all.equal.scidbdf Test if two SciDB arrays are equal in content
antijoin antijoin
apply-method Class '"scidb"'
as.scidb Upload an R vector, matrix or data.frame to a SciDB array.
asin-method Class '"scidb"'
asin-method Class '"scidbdf"'
atan-method Class '"scidb"'
atan-method Class '"scidbdf"'
attribute_rename Rename an attribute.

-- B --

bernoulli Sample from populated cells in a SciDB array.
between between
bind bind
bound Return a bounded or unbounded version of a SciDB array
build build

-- C --

c Concatenate SciDB arrays
c-method Concatenate SciDB arrays
cast Low-level SciDB cast operator
chunk_map chunk_map
cos-method Class '"scidb"'
cos-method Class '"scidbdf"'
count Miscellaneous methods from package 'scidb'
count-method Miscellaneous methods from package 'scidb'
crossprod-method Class '"scidb"'
cumulate cumulate

-- D --

df2scidb Copy a data frame into a SciDB array.
diag-method Class '"scidb"'
diff.scidb diff
dim.scidb dim
dimensions dimensions
dimension_rename Rename a dimension.
dimnames.scidb dimnames
dist Distance Matrix Computation
dist-method Distance Matrix Computation

-- E --

exp-method Class '"scidb"'
exp-method Class '"scidbdf"'

-- F --

factor_scidb Hybrid R/SciDB factors
Filter Class '"scidb"'
Filter-method Class '"scidb"'
Filter-method Class '"scidbdf"'

-- G --

glm Fitting generalized linear models
glm-method Fitting generalized linear models
glm.fit Fitting generalized linear models
glm.fit-method Fitting generalized linear models

-- H --

head-method Class '"scidb"'
head-method Class '"scidbdf"'
hist Methods for Function 'hist' in Package 'scidb'
hist-method Methods for Function 'hist' in Package 'scidb'

-- I --

image Class '"scidb"'
image-method Class '"scidb"'
index_lookup index_lookup
iqdf Sample from populated cells in a SciDB array.
iquery Simple SciDB query tool
is.scidb is.scidb
is.scidb-method Class '"scidb"'
is.scidbdf is.scidbdf
is.scidbdf-method Class '"scidbdf"'
is.temp is.temp

-- K --

kmeans kmeans
kmeans-method kmeans

-- L --

lag lag
lag-method lag
length.scidb length
levels_scidb Hybrid R/SciDB factors

-- M --

max Miscellaneous methods from package 'scidb'
max-method Miscellaneous methods from package 'scidb'
mean Miscellaneous methods from package 'scidb'
mean-method Miscellaneous methods from package 'scidb'
median Miscellaneous methods from package 'scidb'
median-method Miscellaneous methods from package 'scidb'
merge Methods for Function 'merge' in Package 'scidb'
merge-method Methods for Function 'merge' in Package 'scidb'
min Miscellaneous methods from package 'scidb'
min-method Miscellaneous methods from package 'scidb'
model_scidb Fitting generalized linear models

-- N --

na.locf Methods for Function 'na.locf' in Package 'scidb'
na.locf-method Methods for Function 'na.locf' in Package 'scidb'
names.scidb Dimension names
ncol.scidb Number of rows or columns of a SciDB matrix.
nrow.scidb Number of rows or columns of a SciDB matrix.

-- O --

Ops.scidb Binary scidb object operations.
order-method Methods for Function 'order' in Package 'scidb'
order.scidb Methods for Function 'order' in Package 'scidb'
order.scidb-method Methods for Function 'order' in Package 'scidb'

-- P --

peek Sample from populated cells in a SciDB array.
persist persist
phyper Hypergeometric functions in Package 'scidb'
phyper-method Hypergeometric functions in Package 'scidb'
predict Prediction for SciDB GLM fits
predict.glm_scidb Prediction for SciDB GLM fits
print-method Class '"scidb"'
print-method Class '"scidbdf"'
print.scidb Print a summary of a SciDB array object.
project project

-- Q --

qhyper Hypergeometric functions in Package 'scidb'
qhyper-method Hypergeometric functions in Package 'scidb'
quantile.scidb Sample Quantiles
quantile.scidbdf Sample Quantiles

-- R --

rank Methods for Function 'rank' in Package 'scidb'
rank-method Methods for Function 'rank' in Package 'scidb'
redimension redimension
regrid Class '"scidb"'
regrid-method Class '"scidb"'
regrid-method Class '"scidbdf"'
remove_old_versions Remove all but most recent SciDB versions of an array.
rename Rename a SciDB array.
repart repart
replaceNA Replace SciDB NULL values with another value.
reshape Methods for Function 'reshape' in Package 'scidb'
reshape-method Methods for Function 'reshape' in Package 'scidb'

-- S --

schema schema
scidb Create a 'scidb' reference object.
scidb-class Class '"scidb"'
scidbconnect Connect to a SciDB database.
scidbdf-class Class '"scidbdf"'
scidbdisconnect Disconnect from a SciDB database.
scidbeval scidbeval
scidblist List SciDB database items.
scidbls List SciDB database items.
scidbremove Remove an array.
scidbrm Remove an array.
scidb_attributes Scidb schema utilities
scidb_coordinate_bounds Scidb schema utilities
scidb_coordinate_chunksize Scidb schema utilities
scidb_coordinate_end Scidb schema utilities
scidb_coordinate_overlap Scidb schema utilities
scidb_coordinate_start Scidb schema utilities
scidb_fisher.test scidb_fisher.test
scidb_nullable Scidb schema utilities
scidb_types Scidb schema utilities
sd Miscellaneous methods from package 'scidb'
sd-method Miscellaneous methods from package 'scidb'
show-method Class '"scidb"'
show-method Class '"scidbdf"'
show_commit_log Display recent package software repository commit log entries
sin-method Class '"scidb"'
sin-method Class '"scidbdf"'
slice Low-level SciDB slice operator
sort-method Methods for Function 'sort' in Package 'scidb'
sqrt-method Class '"scidb"'
sqrt-method Class '"scidbdf"'
str.scidb Show the structure of a scidb object.
subarray Wrapper for SciDB subarray and between operators
subset Methods for Function 'subset' in Package 'scidb'
subset-method Methods for Function 'subset' in Package 'scidb'
sum Miscellaneous methods from package 'scidb'
sum-method Miscellaneous methods from package 'scidb'
summary.scidb Summarize scidb object class.
svd svd
svd-method svd
sweep Methods for Function 'sweep' in Package 'scidb'
sweep-method Methods for Function 'sweep' in Package 'scidb'

-- T --

t-method Class '"scidb"'
tail-method Class '"scidb"'
tail-method Class '"scidbdf"'
tan-method Class '"scidb"'
tan-method Class '"scidbdf"'
tcrossprod-method Class '"scidb"'
tsvd tsvd
tsvd-method tsvd

-- U --

unbound Return a bounded or unbounded version of a SciDB array
unpack-method Class '"scidb"'
unpack-method Class '"scidbdf"'

-- V --

var Miscellaneous methods from package 'scidb'
var-method Miscellaneous methods from package 'scidb'

-- X --

xgrid Class '"scidb"'
xgrid-method Class '"scidb"'
xgrid-method Class '"scidbdf"'

-- misc --

%!=% Masking comparison methods from package 'scidb'
%!=%-method Masking comparison methods from package 'scidb'
%*%-method Class '"scidb"'
%<% Masking comparison methods from package 'scidb'
%<%-method Masking comparison methods from package 'scidb'
%<=% Masking comparison methods from package 'scidb'
%<=%-method Masking comparison methods from package 'scidb'
%==% Masking comparison methods from package 'scidb'
%==%-method Masking comparison methods from package 'scidb'
%>% Masking comparison methods from package 'scidb'
%>%-method Masking comparison methods from package 'scidb'
%>=% Masking comparison methods from package 'scidb'
%>=%-method Masking comparison methods from package 'scidb'