getMinimumSubsumer {GOSim} | R Documentation |
Returns the minimum subsumer (i.e. the common ancestor having the maximal information content) of two GO terms
getMinimumSubsumer(term1, term2)
term1 |
GO term 1 |
term2 |
GO term 2 |
The result is computed within the currently set ontology ("BP","MF","CC").
GO term representing the minimum subsumer
Holger Froehlich
P. Resnik, Using Information Content to evaluate semantic similarity in a taxonomy, Proc. 14th Int. Conf. Artificial Intel., 1995
getTermSim
, getGOGraph
, link{setOntology}
# setOntology("BP") getMinimumSubsumer("GO:0006955","GO:0007584") # returns GO:0050896