print.pvclust {pvclust} | R Documentation |
print clustering method and distance measure used in
hierarchical clustering, p-values and related statistics for
a pvclust
object.
## S3 method for class 'pvclust': print(x, which=NULL, digits=3, ...)
x |
object of class pvclust . |
which |
numeric vector which specifies the numbers of edges
(clusters) of which the values are printed. If NULL is given,
it prints the values of all edges. The default is NULL . |
digits |
integer indicating the precision to be used in rounding. |
... |
other parameters used in the function. |
this function prints p-values and some related statistics.
au |
AU (Approximately Unbiased) p-value, which is more accurate than BP value as unbiased p-value. It is computed by multiscale bootstrap resampling. |
bp |
BP (Bootstrap Probability) value, which is a simple
statistic computed by bootstrap resampling. This value tends to be
biased as p-value when the absolute value of c
(explained below) is large. |
se.au, se.bp |
estimated standard errors for au and
bp , respectively. |
v, c |
values related to geometric aspects of
hypotheses. v is signed distance and c is curvature of
the boundary. |
pchi |
p-values of chi-square test based on asymptotic theory. |
Ryota Suzuki ryota.suzuki@is.titech.ac.jp