aresPlot {ARES} | R Documentation |
Plots an allelic richness accumulation curve, on the basis of the output
from aresCalc
.
aresPlot(output_aresCalc, T = "mytitle")
output_aresCalc |
the output matrix from aresCalc, a dataframe with three columns |
T |
the plot title |
The function returns a plot of the estimated allelic richness with 95% confidence bounds.
Emiel van Loon
van Loon EE, Cleary DFR, Fauvelot C (2006) ARES: software to compare allelic richness between uneven samples. Molecular Ecology Notes, (in review)
# allelic richness of the butterfly Drupadia theda (Felder), # at a study site B1 in the year 1998 compared to that in 2000 data(butterfly_borneo) b198 <- aresCalc(bb198,bootsize=4,maxsize=60) aresPlot(b198, T="1998, B1") b100 <- aresCalc(bb100,bootsize=4,maxsize=60) aresPlot(b100, T="2000, B1") # note!!! these examples use a very small bootstrap size (for speed of display). # A more realistic size is bootsize=200.