![[R logo]](../../../doc/html/logo.jpg){kind=logo}
![[Package List]](../../../doc/html/left.jpg){kind=small}
![[Top]](../../../doc/html/up.jpg){kind=small}
| BiodiversityR-package | GUI for biodiversity and community ecology analysis |
| accumcomp | Alternative Species Accumulation Curve Results |
| accumplot | Alternative Species Accumulation Curve Results |
| accumresult | Alternative Species Accumulation Curve Results |
| add.spec.scores | Add Species Scores to Unconstrained Ordination Results |
| balanced.specaccum | Balanced Species Accumulation Curves |
| BCI.env | Barro Colorado Island Quadrat Descriptions |
| BiodiversityR | GUI for biodiversity and community ecology analysis |
| BiodiversityRGUI | GUI for Biodiversity Analysis and Ordination |
| CAPdiscrim | Canonical Analysis of Principal Coordinates based on Discriminant Analysis |
| caprescale | Rescaling of Capscale Results to Reflect Total Sums of Squares Of Distance Matrix |
| check.datasets | Synchronize Community and Environmental Datasets |
| check.ordiscores | Synchronize Community and Environmental Datasets |
| crosstabanalysis | Presence-absence Analysis by Cross Tabulation |
| deviancepercentage | Calculate Percentage and Significance of Deviance Explained by a GLM |
| dist.eval | Distance Matrix Evaluation |
| dist.zeroes | Distance Matrix Transformation |
| distdisplayed | Compare Distance Displayed in Ordination Diagram with Distances of Distance Matrix |
| disttransform | Community Matrix Transformation |
| diversitycomp | Alternative Diversity Results |
| diversityresult | Alternative Diversity Results |
| faramea | Faramea occidentalis abundance in Panama |
| import.from.Access | Import Community or Environmental Data from Excel or Access |
| import.from.Excel | Import Community or Environmental Data from Excel or Access |
| loaded.citations | Give Citation Information for all Loaded Packages |
| makecommunitydataset | Make a Community Dataset from a Stacked Dataset |
| multiconstrained | Pairwise Comparisons for All Levels of a Categorical Variable by RDA, CCA or Capscale |
| nested.anova.dbrda | Nested Analysis of Variance via Distance-based Redundancy Analysis or Non-parametric Multivariate Analysis of Variance |
| nested.npmanova | Nested Analysis of Variance via Distance-based Redundancy Analysis or Non-parametric Multivariate Analysis of Variance |
| NMSrandom | Calculate the NMS Result with the Smallest Stress from Various Random Starts |
| nnetrandom | Calculate the NNET Result with the Smallest Value from Various Random Starts |
| ordibubble | Add Other Graphical Items to Ordination Diagrams |
| ordicluster2 | Add Other Graphical Items to Ordination Diagrams |
| ordicoeno | Coenoclines for an Ordination Axis |
| ordiequilibriumcircle | PCA Significance |
| ordihull.centroids | Add Other Graphical Items to Ordination Diagrams |
| ordinearest | Add Other Graphical Items to Ordination Diagrams |
| ordispider.centroids | Add Other Graphical Items to Ordination Diagrams |
| ordisymbol | Add Other Graphical Items to Ordination Diagrams |
| ordivector | Add Other Graphical Items to Ordination Diagrams |
| PCAsignificance | PCA Significance |
| radfitresult | Alternative Rank Abundance Fitting Results |
| rankabuncomp | Rank Abundance Curves |
| rankabundance | Rank Abundance Curves |
| rankabunplot | Rank Abundance Curves |
| removeNAcomm | Synchronize Community and Environmental Datasets |
| removeNAenv | Synchronize Community and Environmental Datasets |
| removezerospecies | Synchronize Community and Environmental Datasets |
| renyiaccumresult | Alternative Renyi Diversity Results |
| renyicomp | Alternative Renyi Diversity Results |
| renyiplot | Alternative Renyi Diversity Results |
| renyiresult | Alternative Renyi Diversity Results |
| residualssurface | Show and Interpolate Two Dimensional Distribution of Residuals |
| same.sites | Synchronize Community and Environmental Datasets |
| spatialsample | Spatial Sampling within a Polygon |
| subsetcomm | Synchronize Community and Environmental Datasets |
| transfgradient | Gradient for Hypothetical Example of Turover of Species Composition |
| transfspecies | Hypothetical Example of Turover of Species Composition |
| warcom | Warburgia ugandensis AFLP Scores |
| warenv | Warburgia ugandensis Population Structure |