BiodiversityR-package | GUI for biodiversity and community ecology analysis |
accumcomp | Alternative Species Accumulation Curve Results |
accumplot | Alternative Species Accumulation Curve Results |
accumresult | Alternative Species Accumulation Curve Results |
add.spec.scores | Add Species Scores to Unconstrained Ordination Results |
balanced.specaccum | Balanced Species Accumulation Curves |
BCI.env | Barro Colorado Island Quadrat Descriptions |
BiodiversityR | GUI for biodiversity and community ecology analysis |
BiodiversityRGUI | GUI for Biodiversity Analysis and Ordination |
CAPdiscrim | Canonical Analysis of Principal Coordinates based on Discriminant Analysis |
caprescale | Rescaling of Capscale Results to Reflect Total Sums of Squares Of Distance Matrix |
check.datasets | Synchronize Community and Environmental Datasets |
check.ordiscores | Synchronize Community and Environmental Datasets |
crosstabanalysis | Presence-absence Analysis by Cross Tabulation |
deviancepercentage | Calculate Percentage and Significance of Deviance Explained by a GLM |
dist.eval | Distance Matrix Evaluation |
dist.zeroes | Distance Matrix Transformation |
distdisplayed | Compare Distance Displayed in Ordination Diagram with Distances of Distance Matrix |
disttransform | Community Matrix Transformation |
diversitycomp | Alternative Diversity Results |
diversityresult | Alternative Diversity Results |
faramea | Faramea occidentalis abundance in Panama |
import.from.Access | Import Community or Environmental Data from Excel or Access |
import.from.Excel | Import Community or Environmental Data from Excel or Access |
loaded.citations | Give Citation Information for all Loaded Packages |
makecommunitydataset | Make a Community Dataset from a Stacked Dataset |
multiconstrained | Pairwise Comparisons for All Levels of a Categorical Variable by RDA, CCA or Capscale |
nested.anova.dbrda | Nested Analysis of Variance via Distance-based Redundancy Analysis or Non-parametric Multivariate Analysis of Variance |
nested.npmanova | Nested Analysis of Variance via Distance-based Redundancy Analysis or Non-parametric Multivariate Analysis of Variance |
NMSrandom | Calculate the NMS Result with the Smallest Stress from Various Random Starts |
nnetrandom | Calculate the NNET Result with the Smallest Value from Various Random Starts |
ordibubble | Add Other Graphical Items to Ordination Diagrams |
ordicluster2 | Add Other Graphical Items to Ordination Diagrams |
ordicoeno | Coenoclines for an Ordination Axis |
ordiequilibriumcircle | PCA Significance |
ordihull.centroids | Add Other Graphical Items to Ordination Diagrams |
ordinearest | Add Other Graphical Items to Ordination Diagrams |
ordispider.centroids | Add Other Graphical Items to Ordination Diagrams |
ordisymbol | Add Other Graphical Items to Ordination Diagrams |
ordivector | Add Other Graphical Items to Ordination Diagrams |
PCAsignificance | PCA Significance |
radfitresult | Alternative Rank Abundance Fitting Results |
rankabuncomp | Rank Abundance Curves |
rankabundance | Rank Abundance Curves |
rankabunplot | Rank Abundance Curves |
removeNAcomm | Synchronize Community and Environmental Datasets |
removeNAenv | Synchronize Community and Environmental Datasets |
removezerospecies | Synchronize Community and Environmental Datasets |
renyiaccumresult | Alternative Renyi Diversity Results |
renyicomp | Alternative Renyi Diversity Results |
renyiplot | Alternative Renyi Diversity Results |
renyiresult | Alternative Renyi Diversity Results |
residualssurface | Show and Interpolate Two Dimensional Distribution of Residuals |
same.sites | Synchronize Community and Environmental Datasets |
spatialsample | Spatial Sampling within a Polygon |
subsetcomm | Synchronize Community and Environmental Datasets |
transfgradient | Gradient for Hypothetical Example of Turover of Species Composition |
transfspecies | Hypothetical Example of Turover of Species Composition |
warcom | Warburgia ugandensis AFLP Scores |
warenv | Warburgia ugandensis Population Structure |