Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data

Documentation for package ‘FTICRMS’ version 0.7

FTICRMS-package	Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) Analysis
baseline	Calculate Baselines for FT-ICR MS Spectra
display.tests	Display Full Test Information for Peaks
extract.pars	Extract Parameters from File
FTICRMS	Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) Analysis
locate.peaks	Locate Peaks in a FT-ICR MS Spectrum
make.par.file	Create Parameter File for FT-ICR MS Analysis
run.all	Complete Analysis of FT-ICR MS Data
run.analysis	Test for Significant Peaks in FT-ICR MS by Controlling FDR
run.baselines	Calculate Baselines for FT-ICR spectra
run.cluster.matrix	Identify Equivalent Peaks from Different Subjects
run.lrg.peaks	Extract "Large" Peaks from Files
run.peaks	Locate Potential Peaks in FT-ICR MS Spectra
run.strong.peaks	Locate Peaks that are "Large" in All Samples