gexgraph {GExMap}R Documentation

Produces graphics to illustrate genomic density and statistical test results

Description

Function of the GExMap package which produces graphics in pdf files with data produces by the gexmap() main function.

Usage

gexgraph(genome.test, scale, results.graph, W)

Arguments

genome.test Matrix of all data of genomic density, localizations and tests results to be graphically reported.
scale The variable scale is the scale used to produce the graphics and to perform the statistical tests. Customizable in input in the gexmap(scale="") main function, the scale is set to 1 000 000 bp by default.
results.graph Folder path where will be saved all the graphics pdf files.
W W is the variable which permit to produecs graphics for each of the two methods of hazard estimation. 1 for the specific method, 2 for the global method.

Details

This function is included in the GExMap package and could not be used independently.

Value

This function produces on pdf file by chromosom statistically validated.

Author(s)

Nicolas Cagnard <nicolas.cagnard@inserm.fr>

See Also

GExMap


[Package GExMap version 1.0 Index]