ge03d2 {GenABEL} | R Documentation |
ge03d2
A small data set (approximately 1,000 people and 8,000 SNPs) containing
data on 3 autosomes and X chromsome. Is a good set for
demonatration of the QC procedures (different genotyping errors
are introduced) and GWA analysis. Run demo(ge03d2) to see a demo.
This data set was developed for the "Advances in population-
based studies" (Ge03) course of the Nihes.
ge03d2c
A small data set (approximately 200 people and 8,000 SNPs) containing
data on 3 autosomes and X chromsome. This data set is
complementary to ge03d2
.
ge03d2ex
A small data set (approximately 150 people and 4,000 SNPs) containing
data on 3 autosomes and X chromsome. Is a good set for
demonatration of the QC procedures (different genotyping errors
are introduced) and GWA analysis.
This data set was developed for the "Advances in population-
based studies" (Ge03) course of the Nihes.
See vignette "GenABEL-tutorial.pdf" for details.
The data sets with extension ".clean" are sets after QC.
data(ge03d2)
#main example: use this to see full functionality # demo(ge03d2) # load and work with ge03d2 data(ge03d2) a <- qtscore(dm2,ge03d2) plot(a)