sm.name {GeneNT} | R Documentation |
This function extracts gene names from data matrix and use it for output.
sm.name(m)
m |
M is a data matrix |
Returns a vector object of gene names.
Dongxiao Zhu (http://dongxiaozhu.googlepages.com/home)
Zhu, D., Hero, A.O., Qin, Z.S. and Swaroop, A. High throughput screening of co-expressed gene pairs with controlled False Discovery Rate (FDR) and Minimum Acceptable Strength (MAS). Submitted.
## load GeneNT library library(GeneNT) ## load example dataset data(dat) ## Note, data matrix name has to be "dat" ## calculate correlation matrix M <- cor(t(dat)) ## extract gene names (matrix object) from the correlation matrix NL <- sm.name(M)