PlotFreq {Geneland} | R Documentation |
Plot of allele frequencies in present time populations number
ipop
,
for allele iall
of locus iloc
PlotFreq(genotypes, path.mcmc,ipop,iloc,iall,printit=FALSE,path)
genotypes |
the matrix of genotypes |
path.mcmc |
Path to output files directory |
ipop |
|
iloc |
Integer number : index of locus |
iall |
Integer number : index of allele. If MCMC
was launched with option filter.null.alleles=TRUE , an extra
fictive allele standing for putative null alleles is created. It
estimated frequency can be also plotted. If there is say, 5 alleles
at a locus, the estimated frequency of null alleles can be seen
invoking PlotFreq with iall=6 . |
printit |
Logical : if TRUE, figures are also printed |
path |
Character : Path to directory where figures should be printed |
Gilles Guillot