Graphical display of pairwise linkage disequilibria between SNPs


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Documentation for package ‘LDheatmap’ version 0.2-7

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CEUData Example data set for LDheatmap
CEUDist Example data set for LDheatmap
CEUSNP Example data set for LDheatmap
CHBJPTData Example data set for LDheatmap
CHBJPTDist Example data set for LDheatmap
CHBJPTSNP Example data set for LDheatmap
hapmapCEU Example data set for LDheatmap
hapmapCHB Example data set for LDheatmap
hapmapJPT Example data set for LDheatmap
LDheatmap This function produces a pairwise LD plot.
LDheatmap.highlight Highlight a genetic region in the linkage disequilibrium heat map
LDheatmap.marks Plots a symbol in the centers of cells of the heat map image