HWE2sided.table {LDtests} | R Documentation |
Table and plot of HWE p-values for all possible contingency tables consistent with the margins of the input observed contingency table. See HWE2sided
for details of the p-values calculated.
HWE2sided.table(maf, n, ylim = c(0, 1), xlim = NULL)
maf |
Minor allele frequency |
n |
Total genotype count |
ylim |
Y-axis range for plot |
xlim |
X-axis range for plot |
Outputs the table of HWE p-values for all the contingency tables consistent with the margins of the input table.
Alex Lewin
Kulinskaya and Lewin 2008
HWE2sided.table(0.17,100) geno <- c(20,73,7) HWE2sided(geno)