LIMRigaAutumn {LIM} | R Documentation |
Linear inverse model specification for the Gulf of Riga planktonic food web in *autumn* as in Donali et al. (1999).
The Gulf of Riga is a highly eutrophic system in the Baltic Sea.
The foodweb comprises 7 functional compartments and two external compartments, connected with 26 flows. Units of the flows are mg C/m3/day
The linear inverse model LIMRigaAutumn is generated from the file RigaAutumn.input which can be found in subdirectory /examples/FoodWeb of the packages directory
In this subdirectory you will find many foodweb example input files
These files can be read using Read
and their output processed by
Setup
which will produce a linear inverse problem specification similar to LIMRigaAutumn
data(LIMRigaAutumn)
a list of matrices, vectors, names and values that specify the linear inverse model problem.
see the return value of Setup
for more information about this list
A more complete description of this structures is in vignette("LIM")
Karline Soetaert <k.soetaert@nioo.knaw.nl> Dick van Oevelen<d.vanoevelen@nioo.knaw.nl>
Donali, E., Olli, K., Heiskanen, A.S., Andersen, T., 1999. Carbon flow patterns in the planktonic food web of the Gulf of Riga, the Baltic Sea: a reconstruction by the inverse method. Journal of Marine Systems 23, 251..268.
LIMTakapoto
, LIMRigaSummer
, LIMRigaSpring
and many others
rigaAutumn <- Flowmatrix(LIMRigaAutumn) plotweb(rigaAutumn,main="Gulf of Riga planktonic food web, autumn", sub="mgC/m3/day") # ranges of flows Plotranges(LIMRigaAutumn,lab.cex=0.7,xlab="mgC/m3/d", main="Gulf of Riga planktonic food web, autumn, Flowranges") # ranges of variables Plotranges(LIMRigaAutumn,type="V",lab.cex=0.7,xlab="mgC/m3/d", main="Gulf of Riga planktonic food web, autumn, variables")