GdataPed {MasterBayes}R Documentation

GdataPed Object

Description

An object containing genotype data and the categories over which error rates may vary.

Usage

GdataPed(G, id = NULL, categories = NULL, perlocus=FALSE, marker.type="MS", ...)

Arguments

G a list of genotype objects for each locus, or a data.frame to be coerced using genotype.list
id a vector of individual identifiers associated with each genotype, indivdiuals can have more than one observed genotype. If G is a data.frame to be coerced and has a column name id, this will be used.
categories an optional vetcor indicating subsets of genotypes that have different error rates. If G is a data.frame to be coerced and has a column name categories, this will be used.
perlocus if TRUE different error rates are estimated for each locus
marker.type "MS" or "AFLP" for codominant or dominant markers respectively
... further arguments to be passed

Author(s)

Jarrod Hadfield j.hadfield@ed.ac.uk

See Also

MCMCped

Examples

data(WarblerG)
GdP<-GdataPed(WarblerG)

[Package MasterBayes version 2.42 Index]