Penalized Multivariate Analysis

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Documentation for package ‘PMA’ version 1.0.1

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PMA-package Penalized Multivariate Analysis
breastdata Breast cancer gene expression + DNA copy number data set from Chin et al (2006), Cancer Cell
CCA Perform sparse canonical correlation analysis using the penalized matrix decomposition.
CCA.permute Select tuning parameters for sparse canonical correlation analysis using the penalized matrix decomposition.
PlotCGH Plot CGH data
PMA Penalized Multivariate Analysis
PMD Get a penalized matrix decomposition for a data matrix.
PMD.cv Do tuning parameter selection for PMD via cross-validation
SPC Perform sparse principal component analysis
SPC.cv Perform cross-validation on sparse principal component analysis