bugs.script {R2WinBUGS} | R Documentation |
Write file ‘script.txt’ for WinBUGS to read - intended for internal use
bugs.script(parameters.to.save, n.chains, n.iter, n.burnin, n.thin, model.file, debug=FALSE, is.inits, bin, DIC=FALSE, useWINE=.Platform$OS.type != "windows", newWINE=TRUE, WINEPATH=NULL, bugs.seed=NULL, summary.only=FALSE, save.history=TRUE, bugs.data.file, bugs.inits.files)
parameters.to.save |
parameters that should be monitored |
n.chains |
number of Markov chains |
n.iter |
number of total iterations (including burn in) |
n.burnin |
length of burn in |
n.thin |
size of thinning parameter |
model.file |
file containing the model written in WinBUGS code |
debug |
if FALSE , WinBUGS is closed automatically,
otherwise WinBUGS remains open for further investigation |
is.inits |
logical; whether initial values are given by the user
(TRUE ) or have to be generated by WinBUGS |
bin |
number of iterations between saving of results |
DIC |
logical; if TRUE , compute deviance, pD, and DIC
automatically in WinBUGS |
useWINE |
as in bugs meta function |
newWINE |
as in bugs meta function |
WINEPATH |
as in bugs meta function |
bugs.seed |
random seed for WinBUGS (default is no seed) |
summary.only |
If TRUE , only a parameter summary for very quick analyses is given,
temporary created files are not removed in that case. |
save.history |
If TRUE (the default), trace plots are generated at the end. |
bugs.data.file |
character name of the data file |
bugs.inits.files |
character vector of names of the inits files |
Nothing, but as a side effect, the script file ‘script.txt’ is written
The main function to be called by the user is bugs
.