longPheno.dat {SimHap} | R Documentation |
longPheno.dat
is an example phenotypic data set containing biological measures to be used by snp.long
and haplo.long
data(longPheno.dat)
A data frame with 601 observations on the following 12 variables.
id
year
time
sex
age
height
weight
bmi
fev1f
longPheno.dat
was simulated to take the format of the Busselton Health Survey from Western Australia.
data(SNPlong.dat) # transforms SNPlong.dat to an object containing 3 columns # per SNP - additive, dominant and recessive, where genotypes # defined in 'baseline' serve as the baseline genotypes longGeno.dat <- SNP2Geno(SNPlong.dat, baseline=c("AA", "GG", "V2V2")) data(longPheno.dat) mymodel <- snp.long(fixed=fev1f~SNP_1_add, random=~1|id, geno=longGeno.dat, pheno=longPheno.dat, form=~year|id) summary(mymodel)