InFile {SpectralGEM} | R Documentation |
The function generates a text file that contains the parameters needed in the main fortran program and saves it in the current directory.
InFile(identifier="smal",stage="1",directory="./", MMfile="MMprime.txt",excludefile="exclude.txt", idlength=8,mincluster=10,logtype=0, outfile="matching_input.txt")
identifier |
must be 4-letters long |
stage |
must be 1-letter long |
directory |
the directory where the files will be generated |
MMfile |
the MMprime matrix file name |
excludefile |
the name of the file where the outliers have been or will be written to |
idlength |
the number of letters the longest sample name has |
mincluster |
the smallest cluster required when do clustering |
logtype |
the type of log information output to the log file: 0=limited, 2=lots |
outfile |
The name of the output file. |
The function generates a text file with one column which contains all the parameters needed. The parameters need to be in the right order in order for the main fortran program to use.
A text file is saved in the current directory.
Ann Lee, Diana Luca, Bert Klei, Bernie Devlin, and Kathryn Roeder
Maintainer: Jing Wu jwu@stat.cmu.edu
http://wpicr.wpic.pitt.edu/WPICCompGen/Spectral-GEM/GEM+.htm
http://wpicr.wpic.pitt.edu/WPICCompGen/Spectral-GEM/matching_input.txt