PvalBootMean {WaveCGH} | R Documentation |
This function finds break means using MODWT. Then calculates p-values for testing means using bootstrap method.
PvalBootMean(x, ModelSelection = FALSE, nsim = 200)
x |
Array-CGH data. |
ModelSelection |
|
nsim |
Number of bootstrap simulations. |
Vector of p-values of length equal to that of original series.
A. I. McLeod and M. S. Islam
Islam, M. S. (2008). Periodicity, Change Detection and Prediction in Microarrays. Ph.D. Thesis, The University of Western Ontario.
data(arrayCGH) ch<- arrayCGH[,2] # We use first and second chromosomes set.seed(123) PvalBootMean(arrayCGH[(ch==1|ch==2),1])