repool {adegenet} | R Documentation |
The function repool
allows to merge genotypes from different
genind objects into a single 'pool' (i.e. a new genind).
The markers have to be the same for all objects to be merged, but
there is no constraint on alleles.
This function can be useful, for instance, when hybrids are created
using hybridize
, to merge hybrids with their parent
population for further analyses. Note that repool
can also
reverse the action of seppop
.
repool(...)
... |
can be i) a list whose components are valid genind objects or, ii) several valid genind objects separated by commas. |
A genind object.
Thibaut Jombart jombart@biomserv.univ-lyon1.fr
## use the cattle breeds dataset data(microbov) temp <- seppop(microbov) names(temp) ## hybridize salers and zebu -- nasty cattle zebler <- hybridize(temp$Salers, temp$Zebu, n=40) zebler ## now merge zebler with other cattle breeds nastyCattle <- repool(microbov, zebler) nastyCattle