print.Rd {amei} | R Documentation |
Summarizing, printing, and plotting the contents of a
the following objects "MCepi"
, "optvac"
,
"epiman"
. In the current version the printing
and summary commands are very similar
## S3 method for class 'MCepi': print(x, ...) ## S3 method for class 'optvac': print(x, ...) ## S3 method for class 'epiman': print(x, ...) ## S3 method for class 'MCepi': summary(object, ...) ## S3 method for class 'optvac': summary(object, ...) ## S3 method for class 'epiman': summary(object, ...) ## S3 method for class 'summary.MCepi': print(x, ...) ## S3 method for class 'summary.optvac': print(x, ...) ## S3 method for class 'summary.epiman': print(x, ...)
object |
an object of class "MCepi" , "optvac" , or
"epiman" that must be named
object for the generic methods summary |
x |
an object of class "MCepi" , "optvac" , or
"epiman" that must be named x for generic printing
and plotting via print |
... |
passed to the generic print or
summary commands |
The printing and summaries provided by these functions are
essentially identical except that summary
returns a list
that allows the information to be extracted for external use
(in code) whereas the printing adds some additional text for
human consumption including information about the call
Other ways of extracting information contained in these objects
include the functions getvac
, getcost
,
and getpolicy
. The plotting functions
plot.MCepi
, plot.optvac
,
and plot.epiman
are also helpful
The list
(s) returned by the summary
command are
detailed in the value section below
The summary
commands documented here return
a list containing (a subset of) the items below.
The other functions do not return values.
obj |
a copy of the input object |
final |
in the case of "MCepi" -class object this
is a data.frame containing a summary of the distribution
of the total number of vaccinations and the final cost; for
"epiman" -class objects the distributional information
is replaced by a scalar |
params |
in the case of "epiman" -class objects
this data.frame containing a summary of the distributional
information of SIR model parameters obtained during the final
time step of the epidemic |
best |
the best policy contained in the "optvac" -class
object |
worst |
the worst policy contained in the "optvac" -class
object |
Daniel Merl <dan@stat.duke.edu>, Leah R. Johnson <leah@statslab.cam.ac.uk>, Robert B. Gramacy <bobby@statslab.cam.ac.uk>, and Mark S. Mangel <msmangl@ams.ucsc.edu>
A statistical framework for the adaptive management of epidemiological interventions (2008). Daniel Merl, Leah R. Johnson, Robert B. Gramacy, and Marc S. Mangel. Duke Working Paper 08-29. http://ftp.stat.duke.edu/WorkingPapers/08-29.html
MCepi
, optvac
,
manage
, MCmanage
,
getvac
, getcost
, getpolicy
,
plot.MCepi
, plot.optvac
,
plot.epiman