summary.analog {analogue} | R Documentation |
summary
method for class "analog"
.
## S3 method for class 'analog': summary(object, display = c("dist", "names", "quantiles"), k = 10, probs = c(0.01, 0.02, 0.05, 0.1, 0.2), ...)
object |
an object of class "analog" , usually as a result
of a call to analog . |
display |
character; one or more of the listed
choices. Determines which aspects of the analog
results are summarised. |
k |
number of analogues to use. If missing, k is chosen
automatically as the k that achieves lowest RMSE. |
probs |
numeric; giving the probabilities of the distribution to
return quantiles for. See quantile . |
... |
arguments passed to or from other methods. |
A list with one or more of the components listed below. Attributes
"method"
, "train"
, "call"
and "k"
contain
the dissimilarity coefficient used, whether the training set
dissimilarities were saved, the matched function call and the number
of close analogues to return respectively.
dists |
a matrix of dissimilarities between training set samples
and fossil samples. The number of rows is given by argument
k . There is a column for each fossil sample. |
names |
a matrix of names of samples from the training set that
are analogues for each fossil sample. The number of rows is given by
argument k . There is a column for each fossil sample. |
quantiles |
numeric; the quantiles of the distribution of the
pairwise dissimilarities for the training set for probabilities
prob . |
Gavin L. Simpson
## Not run: ## continue the RLGH example from ?join example(join) ## analog matching between SWAP and RLGH core swap.analog <- analog(swapdiat, rlgh, method = "chord") swap.analog summary(swap.analog) ## End(Not run)