plot.jags {bayesmix} | R Documentation |
Plots mcmc
chains of a jags
object.
## S3 method for class 'jags': plot(x, variables = NULL, trace = TRUE, density = TRUE, smooth = TRUE, bwf, num, xlim, auto.layout = TRUE, ask = interactive(), ...)
x |
a jags object. |
variables |
names of variables which shall be plotted. Default
are all names of results except those with a column dimension larger
than the number of classes k . |
trace |
plot trace of each variable. |
density |
plot density estimate of each variable. |
smooth |
draw a smooth line through trace plots. |
bwf |
bandwidth function for density plots. |
num |
if not all classes of a variable shall be plotted, a subset can be specified. |
xlim |
if not specified, the range of each variable over all classes is taken as default. |
auto.layout |
automatically generate output format. |
ask |
prompt user before each page of plots. |
... |
further arguments for densityplot . |
Adapted from plot.mcmc
.
Currently only implemented for jags
objects with model of class
BMMmodel
. Otherwise the default plot method for the results
of the jags
object is called (plot.mcmc
).
Bettina Gruen
plot.mcmc
, BMMdiag
,
BMMposteriori