biclustmember {biclust} | R Documentation |
Draws a membership graph cluster x columns, to show which
biclustmember(bicResult,x,mid=T,Titel="BiCluster Membership Graph",...) clustmember(res,x,mid=T,Titel="Cluster Membership Graph",...)
x |
The data matrix |
bicResult |
BiclustResult object with a bicluster result set. If this value is set to NULL, the data matrix is drawn as a heatmap, without any reordering. Default NULL. |
res |
Cluster Result (kcca object) |
mid |
If TRUE, shows the value of the remaining objects inside the cluster value, else shows both aside each other. |
Titel |
Gives the title of the plot |
... |
Additional plot options |
Sebastian Kaiser sebastian.kaiser@stat.uni-muenchen.de
bubbleplot
parallelCoordinates
drawHeatmap
library(vcd) s2=matrix(rnorm(400),20,20) s2[12:16,12:16]=rnorm(25,3,0.3) set.seed(1) bics <- biclust(s2,BCPlaid(), back.fit = 2, shuffle = 3, fit.model = ~m + a + b, iter.startup = 5, iter.layer = 30, verbose = TRUE) biclustmember(bics,s2)