getSampleData {celsius}R Documentation

Retrieve data (sample-wise) into R from Celsius webserver

Description

Retrieves quantified Affymetrix data in multi-graph (MGR) format by array

Usage

getSampleData(celsiusObject, id = c() );

Arguments

celsiusObject Provide a celsius server object with approriate URLs
id character vector of IDs, database accession identifiers for CEL records used in Celsius

Value

Return value is a table with rows labels as SN identifiers and column labels as probeset identifiers.

Author(s)

Jun Dong, Marc Carlson and Allen Day

Examples

#make a celsius instance
celsius = new( "celsiusServer",
  celsiusUrl = "http://celsius.genomics.ctrl.ucla.edu",
  verbose = TRUE );

#get the data
data = getSampleData( celsius, id = c( "SN:1005595" ) );

[Package celsius version 1.0.7 Index]