mapIdToCelsius {celsius}R Documentation

Expands vector of SN or external identifiers to one of SN identifiers

Description

Useful to convert, e.g. GSM or GSE IDs to coresponding SN identifier(s).

Usage

 mapTable = mapIdToCelsius( celsiusObject, id = c());

Arguments

celsiusObject Provide a celsius server object with approriate URLs
id Provide a list of SN or external identifiers

Value

Returns a two-column table. Column 1 contains the "query" identifiers passed in as argument 1, Column 2 contains the "target" identifiers that correspond to the "query" identifiers. Each row pair of identifiers is unique.

Author(s)

Allen Day

Examples

#make a celsius instance
celsius = new( "celsiusServer",
  celsiusUrl = "http://celsius.genomics.ctrl.ucla.edu" );

#define IDs you which to search on
id = c( "AEX:E-MEXP-402", "GSE6210" );

#map the IDs to the celsius database
mapTable = mapIdToCelsius( celsius, id = id );

[Package celsius version 1.0.7 Index]