crosshyb.out {crosshybDetector}R Documentation

Output of crosshyb

Description

This list contains an example of the output of crosshyb.

Usage

data(crosshyb.out)

Value

dataR Dataframe with three columns containing the results of the analysis for the putative corruptor probes applied to the red channel. Contains: i) the probe number, ii) the probe name and iii) the pvalue based on Monte Carlo simulations of being a corruptor (pvalue is corrected for multiple testing)
dataG Same as dataR, but applied to the green channel
childrenR A list containing the corrupted probes for each putative corruptor from the red channel
childrenG As childrenR, but applied to the green channel

References

Uva, P., and de Rinaldis, E. CrossHybDetector: detection of cross-hybridization events in DNA microarray experiments. BMC Bioinformatics 2008, 9:485

Examples

data(crosshyb.out)
str(crosshyb.out)

[Package crosshybDetector version 1.0.4 Index]