ATH.coord {eqtl} | R Documentation |
Data for the physical coordinates of A. thaliana GST (probes).
data(ATH.coord)
A data frame with 30334 observations on the following 4 variables representing GST genomic coordinates:
etrait.name
chr
start
stop
These Gene Sequence Tags are used on the CATMA microarray. See references below. They link to the expression phenotypes measured on their related cross object (here, they decribes the seed10
object). Usually, all expression traits are not taken into account within a QTL analysis, therefore this list could contain more traits than the ones phenotyped within the cross object. On the other hand, every phenotype analysed must be found within ATH.coord
data frame.
Jean-Pierre Renou and Alain Lecharny (CATdb a Complete Arabidopsis Transcriptome database)(http://urgv.evry.inra.fr/CATdb)
Crowe M.L. et al., (2003) CATMA A complete Arabidopsis GST database. Nucleic Acids Res 31:156-158.
data(ATH.coord);