adjMatrix | Adjacency matrix of a graph |
allEdges | All edges of a graph |
basiSet | Basis set of a DAG |
bd | Simple graph operations |
bfs | Breadth first search |
ch | Simple graph operations |
checkIdent | Identifiability of a model with one latent variable |
cliques | Cliques of an undirected graph |
cmpGraph | The complementary graph |
conComp | Connectivity components |
correlations | Marginal and partial correlations |
cycleMatrix | Fundamental cycles |
DAG | Directed acyclic graphs (DAGs) |
drawGraph | Drawing a graph with a simple point and click interface. |
dSep | d-separation |
edgeMatrix | Edge matrix of a graph |
essentialGraph | Essential graph |
findPath | Finding paths |
fitAncestralGraph | Fitting of Gaussian Ancestral Graph Models |
fitConGraph | Fitting of Gaussian concentration graph models |
fitCovGraph | Fitting of Gaussian covariance graph models |
fitDag | Fitting of Gaussian DAG models |
fitDagLatent | Fitting Gaussian DAG models with one latent variable |
fundCycles | Fundamental cycles |
ggm | The package ‘ggm’: summary information |
glucose | Glucose control |
In | Indicator matrix |
inducedChainGraph | Graphs induced by marginalization or conditioning |
inducedConGraph | Graphs induced by marginalization or conditioning |
inducedCovGraph | Graphs induced by marginalization or conditioning |
inducedDAG | Graphs induced by marginalization or conditioning |
InducedGraphs | Graphs induced by marginalization or conditioning |
inducedRegGraph | Graphs induced by marginalization or conditioning |
isAcyclic | Graph queries |
isGident | G-identifiability of an UG |
makeAG | Ancestral Graphs |
marks | Mathematics marks |
pa | Simple graph operations |
parcor | Partial correlations |
pcor | Partial correlation |
pcor.test | Test for zero partial association |
rcorr | Random correlation matrix |
rnormDag | Random sample from a decomposable Gaussian model |
rsphere | Random vectors on a sphere |
shipley.test | Test of all independencies implied by a given DAG |
swp | Sweep operator |
topOrder | Topological sort |
topSort | Topological sort |
transClos | Transitive closure of a graph |
triDec | Triangular decomposition of a covariance matrix |
UG | Defining an undirected graph (UG) |
unmakeAG | Ancestral Graph components |
vertices | Simple graph operations |