mixstock.est {mixstock}R Documentation

construct (or print) a mixed stock analysis estimate object

Description

combine a variety of data into a list with class "mixstock.est"

Usage

mixstock.est(fit, resample = NULL, data = NULL, em = FALSE, sourcesamp =
NULL, mixsamp = NULL, R = NULL, H = NULL, M=1, transf = "full", method =
"unknown", boot.method = "none", boot.data = NULL, GR = NULL, prior =
NULL)
## S3 method for class 'mixstock.est':
print(x,debug=FALSE,...)

Arguments

fit a fit object (from cml, uml, etc.)
resample resampling information
data original data
em (logical) was estimation done by EM algorithm?
sourcesamp source marker samples
mixsamp mixed stock samples
R number of sources
H number of markers
M number of mixed stocks
transf transformation of parameters
method estimation method (cml,uml,mcmc)
boot.method bootstrap method – nonpar, parametric, or mcmc
boot.data bootstrap data
GR Gelman-Rubin diagnostic results
prior prior strength
x a mixstock.est object
debug debug?
... other arguments

Value

an object of type mixstock.est


[Package mixstock version 0.9 Index]