msList {msProcess} | R Documentation |
An msList
object is a list of matrices with each matrix representing a spectrum.
Each matrix in the list has two columns.
The first column is named "mz"
and contains the m/z values.
The second column is named "intensity"
and contains the intensity values.
The list has also an attribute named "type"
, which is of type factor
and contains the classification labels for the spectra.
An object of this class is usually generated from the function msImport()
in package proteome
.
msList
object.
Usage: x[i]
msList
object.msList
objects.
Usage: merge(...)
msList
objects.msList
object.
Usage: plot(x, index=1, type="l", add=FALSE, ...)
msList
object.par
for details. The default is "l"
TRUE
,
the plot is added using the current par()
layout.
Otherwise a new plot is produced. Default: FALSE
.plot
function.msList
object.
Usage: print(x, justify="left", sep=":", ...) or x
msList
object.msList
object.
Usage: summary(x)
msList
object.
if (!exists("qclist")) data("qclist", package="msProcess") ## print an msList object qclist ## print the synopsis of an msList object summary(qclist) ## plot the first spectrum from an msList object plot(qclist, index=1)