A C E F G H I L M N P R S T U V W misc
add.heritability | This function is not intended for user-level use. |
addGE | Assess combinations of univariate multic objects |
all.equal.multic | This function is not intended for user-level use. |
apply.sequential.ids | This function is not intended for user-level use. |
calculate.coefficients | This function is not intended for user-level use. |
calculate.cor.values | This function is not intended for user-level use. |
calculate.correlations | This function is not intended for user-level use. |
calculate.descriptives | This function is not intended for user-level use. |
calculate.initial.values | This function is not intended for user-level use. |
canonical.path.name | This function is not intended for user-level use. |
check.data.for.missing.values | This function is not intended for user-level use. |
check.for.full.data | This function is not intended for user-level use. |
clean | This function is not intended for user-level use. |
collapseMibd | This function is not intended for user-level use. |
combine.null.and.alt.initial.values | This function is not intended for user-level use. |
copy | This function is not intended for user-level use. |
copy.files.to.tmp.space | This function is not intended for user-level use. |
create.multic.object | This function is not intended for user-level use. |
expand.data | Create a "bootstrapped" version of a dataset to be used in multic. |
expand.locus | This function is not intended for user-level use. |
expand.mloci | This function is not intended for user-level use. |
expand.multic | Create "bootstrapped" versions of mloci.out and share.out for multic |
expand.share | This function is not intended for user-level use. |
expandMibd | This function is not intended for user-level use. |
fitted.multic | This function is not intended for user-level use. |
fixibd | This function is not intended for user-level use. |
formula.multic | This function is not intended for user-level use. |
gene.eff | This function is not intended for user-level use. |
get.basename | This function is not intended for user-level use. |
get.cm.close.to.peak | This function is not intended for user-level use. |
get.cM.from.v.mat | This function is not intended for user-level use. |
get.covariance.indices | This function is not intended for user-level use. |
get.df.mix | This function is not intended for user-level use. |
get.dist | This function is not intended for user-level use. |
get.extension | This function is not intended for user-level use. |
get.family.count | This function is not intended for user-level use. |
get.family.parent.inconsistancies | This function is not intended for user-level use. |
get.family.sizes | This function is not intended for user-level use. |
get.major.diagonal.indices | This function is not intended for user-level use. |
get.max.lod.and.locus | This function is not intended for user-level use. |
get.n | This function is not intended for user-level use. |
get.p.mix | This function is not intended for user-level use. |
get.share.order | This function is not intended for user-level use. |
get.top.n.families | This function is not intended for user-level use. |
get.unique.families | This function is not intended for user-level use. |
get.var.covar.labels | This function is not intended for user-level use. |
get.variances.from.file | This function is not intended for user-level use. |
gunzip | This function is not intended for user-level use. |
gzip | This function is not intended for user-level use. |
herit.se | This function is not intended for user-level use. |
is.multic | This function is not intended for user-level use. |
is.parent.offspring | This function is not intended for user-level use. |
is.sibling | This function is not intended for user-level use. |
is.spouse | This function is not intended for user-level use. |
lappend | This function is not intended for user-level use. |
lm.ready.check | This function is not intended for user-level use. |
load.effects | This function is not intended for user-level use. |
load.family.log.likelihoods | This function is not intended for user-level use. |
load.inv.exp.sec.der.fixed | This function is not intended for user-level use. |
load.inv.exp.sec.der.random | This function is not intended for user-level use. |
load.iterations | This function is not intended for user-level use. |
load.residuals | This function is not intended for user-level use. |
load.v.matrices | This function is not intended for user-level use. |
load.v.matrix.file | This function is not intended for user-level use. |
load.var.sandwich | This function is not intended for user-level use. |
load.y.beta.diffs | This function is not intended for user-level use. |
load.y.beta.file | This function is not intended for user-level use. |
make.block.id.pair | This function is not intended for user-level use. |
make.kinship.file | This function is not intended for user-level use. |
max.multic | This function is not intended for user-level use. |
mergeWithKinship | This function is not intended for user-level use. |
missing.value | This function is not intended for user-level use. |
mloci.split | This function is not intended for user-level use. |
mlociCut | This function is not intended for user-level use. |
multic | Create a multic object |
multic.colnames | This function is not intended for user-level use. |
multic.control | Set control parameters for multic |
multic.is.dir | This function is not intended for user-level use. |
multic.kurtosis | This function is not intended for user-level use. |
multic.mkdir | This function is not intended for user-level use. |
multic.object | a multic object |
multic.rownames | This function is not intended for user-level use. |
multic.skewness | This function is not intended for user-level use. |
multic.strings.split | This function is not intended for user-level use. |
multic.strsplit | This function is not intended for user-level use. |
multic.system | This function is not intended for user-level use. |
multic.unlink | This function is not intended for user-level use. |
non.user.level.objects | This function is not intended for user-level use. |
normalize.mibd | This function is not intended for user-level use. |
parse.trait.names | This function is not intended for user-level use. |
pchisq.mix | This function is not intended for user-level use. |
phi2share | Convert a SOLAR-formatted phi2 file into a multic-formatted share.out file. |
plot.family.lods | Plot family contribution to peak LOD |
plot.multic | Plot a multic object |
polygene | This function is not intended for user-level use. |
print.multic | Use print() on a multic object |
print.summary.multic | This function is not intended for user-level use. |
read.pedindex.out | This function is not intended for user-level use. |
recover.multic | This function is not intended for user-level use. |
remove.file | This function is not intended for user-level use. |
remove.temp.files | This function is not intended for user-level use. |
residuals.multic | This function is not intended for user-level use. |
run.alternative.multic | This function is not intended for user-level use. |
solar2mloci | Convert a directory of SOLAR-formatted ibd and/or mibd files into a multic-formatted mloci.out |
solar2multic | Convert SOLAR-formatted output into multic-formatted mloci.out and share.out |
sortIbdCols | This function is not intended for user-level use. |
subsets | Choose Sets Of Size k From The n-Elements Of a Vector |
summary.multic | This function is not intended for user-level use. |
sw2mloci | Convert SimWalk IBD files into a single mloci.out. |
t.rank | Empirical Normal Quantile transformation |
trim | This function is not intended for user-level use. |
upp.tri.as.vector | This function is not intended for user-level use. |
using.R | This function is not intended for user-level use. |
validate.parents | This function is not intended for user-level use. |
validate.share.out | This function is not intended for user-level use. |
write.alt.initial.values | This function is not intended for user-level use. |
write.initial.values | This function is not intended for user-level use. |
[.multic | This function is not intended for user-level use. |