onemap-package |
Software for constructing genetic maps in outcrossing species |
acum |
Cumulative sum |
arbitr.rf.2pts |
Arbitrarily define the linkage phase between two markers |
cr2pts |
Call to the C routine for two-point analysis |
cr3pts |
Call to the C routine for three-point analysis |
est.rf.2pts |
Two-point analysis between genetic markers |
est.rf.3pts |
Three-point analysis of genetic markers |
example_out |
Data from a full-sib family derived from two outbred parents |
extract.group |
Extracts a linkage group for further analysis |
group |
Assign markers to linkage groups |
haldane |
Mapping functions Haldane and Kosambi |
kosambi |
Mapping functions Haldane and Kosambi |
make.map |
Manually define a genetic map |
map |
Estimate the genetic map |
map_func |
Mapping functions Haldane and Kosambi |
modify.rf.2pts |
Update two-point analyses with new criteria |
mrktype |
Type of segregation of a marker |
onemap |
Software for constructing genetic maps in outcrossing species |
print.group |
Assign markers to linkage groups |
print.map |
Estimate the genetic map |
print.rf.2pts |
Two-point analysis between genetic markers |
rcd |
Rapid Chain Delineation |
read.outcross |
Read data from a segregating full-sib population |
remove.marker |
Drop a marker from a linkage group |