Software for constructing genetic maps in outcrossing species


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Documentation for package ‘onemap’ version 0.1-1

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onemap-package Software for constructing genetic maps in outcrossing species
acum Cumulative sum
arbitr.rf.2pts Arbitrarily define the linkage phase between two markers
cr2pts Call to the C routine for two-point analysis
cr3pts Call to the C routine for three-point analysis
est.rf.2pts Two-point analysis between genetic markers
est.rf.3pts Three-point analysis of genetic markers
example_out Data from a full-sib family derived from two outbred parents
extract.group Extracts a linkage group for further analysis
group Assign markers to linkage groups
haldane Mapping functions Haldane and Kosambi
kosambi Mapping functions Haldane and Kosambi
make.map Manually define a genetic map
map Estimate the genetic map
map_func Mapping functions Haldane and Kosambi
modify.rf.2pts Update two-point analyses with new criteria
mrktype Type of segregation of a marker
onemap Software for constructing genetic maps in outcrossing species
print.group Assign markers to linkage groups
print.map Estimate the genetic map
print.rf.2pts Two-point analysis between genetic markers
rcd Rapid Chain Delineation
read.outcross Read data from a segregating full-sib population
remove.marker Drop a marker from a linkage group