plot.qb.pairloci {qtlbim} | R Documentation |
Summaries and detailed scatterplot showing all MCMC samples for epistatic pairs for selected chromosomes.
qb.pairloci(qbObject, chr, ...) ## S3 method for class 'qb.pairloci': plot(x, main, cex = 0.75, ... ) ## S3 method for class 'qb.pairloci': print(x, ... ) ## S3 method for class 'qb.pairloci': summary(object, ... )
qbObject |
Object of class qb . |
object |
Object of class qb.pairloci . |
x |
Object of class qb.pairloci . |
chr |
Identifiers for one or two chromosomes. |
main |
Main title for plot. |
cex |
Character expansion of plot symbols. |
... |
Parameters to methods. |
Find pairs of loci in MCMC samples. Produce scatter plot with generic
plot
or show numerical summary
. The plot provides position
detail complementary to qb.multloci
and
qb.scantwo
.
Brian S. Yandell, yandell@stat.wisc.edu
plot.qb
, qb.scantwo
,
qb.multloci
data(qbExample) tmpar <- par(mfrow = c(2,2)) temp <- qb.pairloci(qbExample, c(1,2)) summary(temp) plot(temp) temp <- qb.pairloci(qbExample, c(1,3)) summary(temp) plot(temp) par(tmpar)