ch3b {qtlbook}R Documentation

Data with bad markers

Description

Anonymous data with markers showing severe segregation distortion.

Usage

data(ch3b)

Format

An object of class cross. See read.cross for details.

Details

An intercross with 144 individuals, each with one phenotype and typed at 145 markers.

Source

Karl W Broman, kbroman@biostat.wisc.edu

See Also

ch3a, ch3c

Examples

data(ch3b)

thetab <- geno.table(ch3b)
plot(-log10(thetab[,ncol(thetab)]), ylab=expression(-log[10](P)))
thetab[thetab[,ncol(thetab)] < 1e-6,]

[Package qtlbook version 0.16-3 Index]