simco-package {simco}R Documentation

Simco: a package to carry out similarity coefficient calculations from Structure output files

Description

Simco is a package that (1) imports Structure output files into R and (2) carries out similarity coefficient calculations on them

Details

Package: simco
Type: Package
Version: 1.01
Date: 2007-12-12
License: GNU General Public Licence

There are two functions included in this package:

SimCoImport: the import function, designed to import and parse data directly from the Structure output files.

SimCoef: the function to do the similarity coefficient analysis.

Examples of Structure output files, and further help, are provided in the docs directory of the simco package (which should be in your R library folder if you have installed simco correctly).

Author(s)

Owen Jones

Maintainer: Owen Jones owen.jones@imperial.ac.uk

References

Rebbeck, CA, Jones, OR, & Tsai, IJ (unpublished) SimCo: A program to automate the comparison of multiple structure runs (available from owen.jones@imperial.ac.uk)

Pritchard, J. K. et al. (2000) Inference of population structure using multilocus genotype data. Genetics. 155, 945-959.

See Also

SimCoImport SimCoef


[Package simco version 1.01 Index]