simPlotOne {similarityRichards}R Documentation

Plot relative backfitted values for Richards curves for one 'sample'

Description

Plot relative backfitted values for Richards curves for one 'sample'.

Usage

simPlotOne(fits, name, indep2conc = function(x) x, ylim = c(min(Z), max(Z)),
           Conf = simConf, main = paste("Backfitted values: ", name),
           sub = paste("Above / below / NA: ",
                       paste("", c(length(which(Z > ylim[2])),
                                   length(which(Z < ylim[1])),
                                   length(which(is.na(Z)))),
                             collapse = " /")),
           xlab = "~ Log(concentration) [Dilution step]",
           ylab = "Relative backfitted concentrations",
           useFitNames = FALSE,
           doPlot = TRUE, ...)

Arguments

fits a list of list of simFits, see simFit. (The double 'list of' is not a typo!)
name a text string, naming the SAMPLE in the list of backfits for each item in fits.
ylim a numeric vector with the range of the y axis.
indep2conc a function for transforming the x axis.
Conf a function for adding confidence intervals, default simConf.
main an overall title for the plot: see title.
sub a sub title for the plot: see title.
xlab a title for the x axis: see title.
ylab a title for the y axis: see title.
useFitNames a boolean: for 'old' mode.
doPlot a boolean: if FALSE then no plot is made.
... additional arguments, to matplot and Conf, see matplot and simConf.

Details

Relative backfitted values for Richards curves for one 'sample' are plottet in one plot.

Value

Matrix with the plottet values for the 'sample'.

Author(s)

Jens Henrik Badsberg


[Package similarityRichards version 0.5.0 Index]