mice {spls} | R Documentation |
This is the Mice dataset used in Chun and Keles (2008).
data(mice)
A list with two components:
The Mice dataset was published by Lan et al. (2006). The x
matrix is
the marker map consisting of 145 microsatellite markers from 19 non-sex mouse chromosomes.
The y
matrix is the gene expression measurements of the 83 transcripts
from liver tissues of 60 mice. This group of the 83 transcripts is one of the clusters
analyzed by Chun and Keles (2008). See Chun and Keles (2008) for more details.
Lan, H., M. Chen, J. B. Flowers, B. S. Yandell, D. S. Stapleton, C. M. Mata, E. T-K Mui, M. T. Flowers, K. L. Schueler, K. F. Manly, R. W. Williams, C. Kendziorski, and A. D. Attie (2006). "Combined expression trait correlations and expression quantitative trait locus mapping", PLoS Genetics, 2, e6.
Chun, H. and Keles, S. (2008). "Expression quantitative trait loci mapping with multivariate sparse partial least squares regression", (http://www.stat.wisc.edu/~keles/Papers/chun_keles_eQTL_SPLS_submit.pdf).
data(mice) mice$x[1:5,1:5] mice$y[1:5,1:5]