summary.phylpro {stepwise} | R Documentation |
Print a summary of a phylpro object
## S3 method for class 'phylpro': summary(object, ...)
object |
A list object of class phylpro output by the phylpro function |
... |
Additional arguments to the summary function (currently unused) |
The output of phylpro
includes information on all
site- and target sequence-specific correlations
that exceed the 90th percentile of
the permutation distribution. The summary.phylpro
function computes
minimum site-specific measures (i.e. minima over all target-sequence
correlations from the same site) and reports all target sequences
that tied for these minimum values.
siteWinlocs |
Window locations with significant recombination signal |
siteCorrs |
The minimum correlation at these window locations |
target.seqs |
The target sequence(s) that give the minimum correlation at each window location |
Brad McNeney <mcneney@stat.sfu.ca>, Jinko Graham <jgraham@stat.sfu.ca>, Sigal Blay <sblay@sfu.ca>
demo(phylpro)