Metropolis sampler and supporting functions for estimating animal movement from archival tags and satellite fixes


[Package List] [Top]

Documentation for package ‘tripEstimation’

Help Pages

as.image.pimg ~~function to do ... ~~
as.local.pimg ~~function to do ... ~~
as.matrix.pimg ~~function to do ... ~~
astro Calculations for position of the sun and moon
behav.bin ~~function to do ... ~~
bin.pimg ~~function to do ... ~~
bits Set and get bits from binary masks.
bmvnorm.proposal Manage proposal functions tune variance for metropolis sampler
chain.dim ~~function to do ... ~~
chain.read ~~function to do ... ~~
chain.write ~~function to do ... ~~
chunk.bin ~~function to do ... ~~
combine ~~function to do ... ~~
coords.pimg ~~function to do ... ~~
elevation ~~ data name/kind ... ~~
EQUHOR Calculations for position of the sun and moon
FRAC Calculations for position of the sun and moon
get.mask Create, access and manipulate spatial masks
get.pimgs ~~function to do ... ~~
initialize.x Diagnose and initialize light level estimation.
julcent Julian day and Julian century calculations from date-time values
julday Julian day and Julian century calculations from date-time values
k.prior simple prior
light.quantile Diagnose and initialize light level estimation.
LMST Calculations for position of the sun and moon
lunar Calculations for position of the sun and moon
metropolis Metropolis-Hastings sampler for location estimation for archival and satellite tag
metropolis0 Metropolis-Hastings sampler for location estimation for archival and satellite tag
mini.sun Calculations for position of the sun and moon
MJD Calculations for position of the sun and moon
mkCalibration Create calibration of solar elevation to measured light level.
mkElevationSeg Older versions of solar location estimation
mkLookup Create a lookup function to query locations against spatial masks
mkNLPosterior Older versions of solar location estimation
mkSmall Create, access and manipulate spatial masks
mvnorm.proposal Manage proposal functions tune variance for metropolis sampler
norm.proposal Manage proposal functions tune variance for metropolis sampler
old.dist.gc Older versions of solar location estimation
old.find.init Older versions of solar location estimation
old.metropolis Older versions of solar location estimation
old.mkLookup Older versions of solar location estimation
pick Choose twilight segments interactively from light data.
picksegs Choose twilight segments interactively from light data.
pimg ~~function to do ... ~~
pimg.list ~~function to do ... ~~
POLAR Calculations for position of the sun and moon
position.logp Diagnose and initialize light level estimation.
satellite.model Function to create a satellite model object for metropolis location sampler
show.segment Diagnose and initialize light level estimation.
solar Calculate solar postion parameters
solar.model Function to create a solar model object for metropolis location sampler
unzipper ~~function to do ... ~~