build.data.paired {varmixt} | R Documentation |
Performs simple operation to build an object for further processing with analysis functions
build.data.paired(name, ratio, meanint, badqual = NULL, gene.anot = NULL,min.rep=2)
name |
vector with the identifier of each gene (one gene per row). |
ratio |
matrix of gene log-ratio. The matrix has one gene per row and one replicate per column |
meanint |
matrix of gene log-intensity |
badqual |
Optional argument : integer matrix of number of bad quality observation per gene and replicate. Do not use badqual with different number of replicates in each condition |
gene.anot |
Optional arguments (vector, data.frame, matrix..) with extra annotation on the genes |
min.rep |
Minimum number of non-missing value per gene and per condition. Must be at least 2. |
A gene expression data object for futher processing
Paul Delmar