build.data {varmixt} | R Documentation |
This function performs simple operations to build an object for further processing with analysis functions
build.data(name,cond1,cond2,badqual=NULL,gene.anot=NULL,min.rep=2)
name |
vector with the identifier of each gene (one gene per row). |
cond1 |
matrix of gene log-intensity in condition 1. The matrix has one gene per row and one replicate per column |
cond2 |
matrix of gene log-intensity in condition 1 |
badqual |
Optional argument : integer matrix of number of bad quality observation per gene and replicate. Do not use badqual with different number of replicates in each condition |
gene.anot |
Optional arguments (vector, data.frame, matrix..) with extra annotation on the genes |
min.rep |
Minimum number of non-missing value per gene and per condition. Must be at least 2. |
A gene expression data object for further processing
Paul Delmar