fdr.compare.res {varmixt}R Documentation

Comparison of the results from 2 analysis

Description

This function compares the results from 2 analysis with FDR criterium

Usage

fdr.compare.res(data1,data2,qval.1=0.05,qval.2=qval.1,display.all=FALSE,lambda=seq(0,0.95,0.05))

Arguments

data1 gene expression data object (results)
data2 gene expression data object (results)
qval.1 FDR cut-off for data1
qval.2 FDR cut-off for data2
display.all
lambda

Value

A data frame with each gene classified as regulated/not-regulated in the two data-set for each method (gene-specific, homoscedastic, Varmixt). Also prints the tables of comparison.

Author(s)

Paul Delmar

See Also

fdr.compare.method,compare.res,vm.analysis, vm.analysis.paired


[Package varmixt version 0.2-4 Index]