vm.analysis.step.2 {varmixt} | R Documentation |
This function performs the last stage of mixture model analysis
vm.analysis.step.2(data, n.mixt = NULL, filename = NULL,crit=c("AIC","BIC")[2],stop.crit.1=1.e-6, criterion.1=c("likelihood","parameter")[1],criterion.2=c("likelihood","parameter")[1], stop.crit.2=1.e-8,display=TRUE)
data |
a gene expression data object |
n.mixt |
number of components in the model |
filename |
optional output filename |
criterion.1 |
either "likelihood" or "parameter". The criterion for stopping EM algorithm while trying to determine the number of variance groups |
stop.crit.1 |
The stopping relative precision limit for stopping EM algorithm |
criterion.2 |
Either "likelihood" or "parameter". The criterion for stopping EM algorithm while trying to estimate the parameters. |
stop.crit.2 |
The stopping relative precision limit for stopping EM algorithm |
display |
Boolean. Should the result of model fitting be displayed on the screen on the fly ? |
Paul Delmar and Julie Aubert
vm.analysis
,vm.analysis.paired