fdr.compare.method {varmixt} | R Documentation |
This function compares the different analysis methods for a given FDR threshold
fdr.compare.method(data,qval=0.05,display.all=FALSE,lambda=seq(0,0.95,0.05))
data |
gene expression data object |
qval |
FDR cut-off |
display.all |
|
lambda |
Argument of the q-value function |
A data frame with each gene classified as regulated/not-regulated in for each method (gene-specific, homoscedastic, Varmixt). Also prints the tables of comparison.
Paul Delmar
fdr.compare.res
,compare.res
,vm.analysis
, vm.analysis.paired