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| affy.chickenChip | Chicken (Affymetrix) :affy.chickenChip |
| affy.hgfocus | Human(Affymetrix) :affy.hgfocus |
| affy.hgu133a | Human(Affymetrix) :affy.hgu133a |
| affy.hgu133a2 | Human(Affymetrix) :affy.hgu133a2 |
| affy.hgu133b | Human(Affymetrix) :affy.hgu133b |
| affy.hgu133plus2 | Human(Affymetrix) :affy.hgu133plus2 |
| affy.mgu74av2 | Mouse (Affymetrix) :affy.mgu74av2 |
| affy.mgu74bv2 | Mouse(Affymetrix) :affy.mgu74bv2 |
| affy.mgu74cv2 | Mouse(Affymetrix) :affy.mgu74cv2 |
| affy.mouse4302 | Mouse(Affymetrix) :affy.mouse4302 |
| affy.mouse430a2 | Mouse(Affymetrix) :affy.mouse430a2 |
| affy.rgu34a | Rat(Affymetrix) :affy.rgu34a |
| affy.rgu34b | Rat(Affymetrix) :affy.rgu34b |
| affy.rgu34c | Rat(Affymetrix) :affy.rgu34c |
| agilent.hgug4110b | Human(Agilent) :agilent.hgug4110b |
| agilent.hgug4112a | Human(Agilent) :agilent.hgug4112a |
| agilent.mgug4122a | Mouse(Agilent) :agilent.mgug4122a |
| BootCL.distribution | Find the bootstrap distribution |
| BootCL.plot | Display the bootstrap distribution and p-value |
| BootCL.print | Display gene lists that are within windowsize consecutively in the same chromosome |
| BootCL.Pvalue | Calculate the P-value |
| BootCL.Statistic | Calculate a measure of chromosomeal spatial bias |
| chickenChip | Chicken(Affymetrix) :HG-U133A |
| codelink.hwgcod | Human(CodeLink) :codelink.hwgcod |
| codelink.mwgcod | Mouse(CodeLink) :codelink.mwgcod |
| codelink.rwgcod | Rat(CodeLink) :codelink.rwgcod |
| find.ID | Match affyID to Accession IDs |
| HG.U133A | Human (Affymetrix) :HG-U133A |
| HG.U133B | Human (Affymetrix) :HG.U133B |
| Hgfocus | Human (Affymetrix) :Hgfocus |
| Hgu133A2 | Human(Affymetrix) :Hgu133A2 |
| Hgu133plus2 | Human (Affymetrix) :Hgu133plus2 |
| hgug4110b | Human(Agilent) :hgug4110b |
| hgug4112a | Human(Agilent) :hgug4112a |
| hwgcod | Human(CodeLink) :hwgcod |
| MG.U74Av2 | Mouse(Affymetrix) :MG.U74Av2 |
| MG.U74Bv2 | Mouse(Affymetrix) :MG.U74Bv2 |
| MG.U74Cv2 | Mouse(Affymetrix) :MG.U74Cv2 |
| mgug4122a | Mouse(Agilent) :mgug4122a |
| Mouse4302 | Mouse(Affymetrix) :Mouse4302 |
| Mouse430A2 | Mouse(Affymetrix) :Mouse430A2 |
| mwgcod | Mouse(CodeLink) :mwgcod |
| RG.U34A | Rat (Affymetrix) :RG.U34A |
| RG.U34B | Rat (Affymetrix) :RG.U34B |
| RG.U34C | Rat (Affymetrix) :RG.U34C |
| rwgcod | Rat (CodeLink) :rwgcod |
| total.count.ws | window size |