Planning and Analyzing Dose Finding experiments


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Documentation for package ‘DoseFinding’ version 0.1-1

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DoseFinding-package Planning and Analyzing Dose Finding experiments
AIC.DRMod Calculate AIC (or BIC) for a DRMod object
betaMod Beta model
biom Biometrics Dose Response data
bootMCPMod Evaluate precision of dose estimate by nonparametric bootstrapping
calcCrit Calculate design criterion for a specified design.
calcOptDesign Function to calculate an optimal design
coef.DRMod Extract coefficients from a DRMod object
critVal Calculate critical value for multiple contrast test
DoseFinding Planning and Analyzing Dose Finding experiments
ED Calculate EDp estimator for a DRMod object
ED.DRMod Calculate EDp estimator for a DRMod object
emax Emax model
exponential Exponential (power) model
fit.control Set control parameters for non-linear model fitting
fitDRModel Fit a non-linear regression model with linear covariates.
fullMod Calculate location and scale parameters for candidate set of models
genDFdata Simulate dose-response data
getBnds Calculates default bounds for non-linear parameters
getGrad Calculate the gradient for the non-linear part of a DRMod object
getInit Starting values for non-linear parameters.
getPars Calculate location and scale parameters
guesst Calculate guesstimates based on prior knowledge
IBScovars Irritable Bowel Syndrome Dose Response data with covariates
intervals.DRMod Calculate confidence intervals for parameters in a DRMod object.
linear Linear Model
linlog Linear in log dose Model
logistic Logistic Model
LP Sensitivity analysis for misspecification of standardized model parameters in MCPMod
MCPMod Perform MCPMod analysis of a data set
MCPtest Perform model-based multiple contrast test
MED Calculate MED for a DRMod object
MED.DRMod Calculate MED for a DRMod object
modelMeans Calculate mean vectors for a given candidate set
mvtnorm.control Control options for pmvt and qmvt functions
planMM Calculate planning quantities for MCPMod
plot.DRMod Plot the dose-response curve of a DRMod object.
plot.fullMod Plot method for fullMod objects
plot.LP Plot method for LP objects
plot.MCPMod Plot MCPMod model fits
plot.planMM Plotting a planMM object
plot.powerMM Plot method for powerMM objects
plotModels Plot candidate models
powCalc Calculate the power for the multiple contrast test
powerMM Calculate power for different sample sizes
powerScenario Calculates the power for an planMM object under a particular alternative scenario
predict.DRMod Predict a DRMod object.
predict.MCPMod Predict a MCPMod object.
print.LP Sensitivity analysis for misspecification of standardized model parameters in MCPMod
print.MCPMod Perform MCPMod analysis of a data set
print.planMM Calculate planning quantities for MCPMod
print.sampSize Sample size calculations for MCPMod
print.summary.MCPMod Perform MCPMod analysis of a data set
quadratic Quadratic model
rndDesign Round a continuous design to integer values.
sampSize Sample size calculations for MCPMod
sigEmax Sigmoid Emax Model
summary.MCPMod Perform MCPMod analysis of a data set
vcov.DRMod Calculate the (asymptotic) variance covariance matrix of a DRMod object