PCIT algorithm - Partial Correlation Coefficient with Information Theory


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Documentation for package ‘PCIT’ version 1.02-2

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PCIT-package Partial Correlation coefficient with Information Theory (PCIT)
clusteringCoefficient Calculate the clustering coefficient
clusteringCoefficientPercent Calculate the clustering coefficient as a percentage
data Demo Data
defineTasks Define a list of tasks for slave CPUs
idx Get indicies for significant edges
idxInvert Invert linear indices from a matrix
m Demo Data
maxMatrixSize Calculate the maximum correlation matrix size which PCIT can handle
PCIT Partial Correlation coefficient with Information Theory (PCIT)
pcit Apply the PCIT algorithm
pcitMemoryRequirement Calculate the memory requirement for running PCIT
plotCorCoeff Plot superimposed histograms of correlation coefficients