Simulating trees under the birth-death model


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Documentation for package ‘TreeSim’ version 1.0

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TreeSim-package TreeSim: Simulating phylogenetic trees
sim.bd.age sim.bd.age: Simulating birth-death trees of a fixed age
sim.bd.taxa sim.bd.taxa: Simulating birth-death trees on a fixed number of extant taxa
sim.bd.taxa.age sim.bd.taxa: Simulating birth-death trees with a given age on a fixed number of extant taxa
sim.gsa.taxa sim.gsa.taxa: Sampling trees on n tips from bigger trees
sim.rateshift.taxa sim.rateshift.taxa: Simulating trees incorporating mass extinction events and rate shifts
TreeSim TreeSim: Simulating phylogenetic trees