Categorical Bayesian Network Inference


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Documentation for package ‘catnet’ version 1.02.0

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catnet-package catnet: Categorical Bayesian Network Inference
alarm The ALARM network
alarmnet The ALARM network
alarmseed The ALARM network
as.graph Graph from catNetwork
as.graph-method Graph from catNetwork
as.igraph catNetwork to igraph
as.igraph-method catNetwork to igraph
breast Breast cancer data
catnet catnet: Categorical Bayesian Network Inference
catNetwork Class "catNetwork"
catNetwork-class Class "catNetwork"
catNetworkDistance Class "catNetworkDistance"
catNetworkDistance-class Class "catNetworkDistance"
catNetworkEvaluate Class "catNetworkEvaluate"
catNetworkEvaluate-class Class "catNetworkEvaluate"
cnCatnetFromEdges catNetwork from Edges
cnCatnetFromEdges-method catNetwork from Edges
cnCatnetFromGraph catNetwork from Graph
cnCatnetFromGraph-method catNetwork from Graph
cnCatnetFromSif catNetwork from Simple Interaction File (SIF)
cnCatnetFromSif-method catNetwork from Simple Interaction File (SIF)
cnCompare Network Comparison
cnCompare-method Network Comparison
cnComplexity Network Complexity
cnComplexity-method Network Complexity
cnDiscretize Data Categorization
cnDot Network Description File
cnDot-method Network Description File
cnEdges Network Edges
cnEdges-method Network Edges
cnEvaluate Network Evaluation from Data
cnEvaluate-method Network Evaluation from Data
cnFind Find Network by Complexity
cnFind-method Find Network by Complexity
cnFindAIC Find Network by AIC
cnFindAIC-method Find Network by AIC
cnFindBIC Find Network by BIC
cnFindBIC-method Find Network by BIC
cnLoglik Sample Log-likelihood
cnLoglik-method Sample Log-likelihood
cnMatEdges Network Edge Matrix
cnMatEdges-method Network Edge Matrix
cnMatParents Network Parent Matrix
cnMatParents-method Network Parent Matrix
cnNew New catNetwork
cnNodeLoglik Node Log-likelihood
cnNodeMarginalProb Node Marginal Probability
cnNodeMarginalProb-method Node Marginal Probability
cnNodes Netwok Nodes
cnNodes-method Netwok Nodes
cnNumNodes Network Size
cnNumNodes-method Network Size
cnOrder Network Node Order
cnOrder-method Network Node Order
cnParents Network Parents
cnParents-method Network Parents
cnParHist Parenthood Histogram
cnParHist-method Parenthood Histogram
cnPearsonTest Goodness of Fit Test
cnPearsonTest-method Goodness of Fit Test
cnPlot Plot Network
cnPlot-method Plot Network
cnPredict Prediction
cnPredict-method Prediction
cnProb Conditional Probability Structure of Network
cnProb-method Conditional Probability Structure of Network
cnRandomCatnet Random Network
cnReorderNodes Reorder Network Nodes
cnReorderNodes-method Reorder Network Nodes
cnSamples Samples from Network
cnSamples-method Samples from Network
cnSearchHist Parent Histogram Matrix
cnSearchHistCluster Parent Histogram Matrix - Parallel Version
cnSearchOrder Network Search for Given Node Order
cnSearchSA Stochastic Network Search
cnSearchSAcluster Stochastic Network Search. Parallel Processing.
cnSetProb Set Probability from Data
cnSetProb-method Set Probability from Data
cnSubNetwork Sub-Network
cnSubNetwork-method Sub-Network
CPDAG Class CPDAG
CPDAG-class Class CPDAG
dag2cpdag Complete Network Representation
dag2cpdag-method Complete Network Representation
isDAG Check Direct Acyclic Graph (DAG) Condition
novartis Novartis multi-tissue data