Calculate observed and expected disease incidence counts from a case file and population data.

Documentation for package ‘diseasemapping’ version 0.5.3

diseasemapping-package	Disease Mapping
CanadaCancerRates	Retreive cancer incidence rates from the Public Health Agency of Canada
casedata	Data set contains the number of cases information
computeArea	Compute areas of polygons
diseasemapping	Disease Mapping
expandCensus	Given population data at each census year and range of the years that the data spans, this function returns a new list of population data for each consective year assuming population is constant between two census years
formatCases	Format the disease case data set
formatPopulation	Format the population data set
formatPopulation.data.frame	Format the population data set
formatPopulation.list	Format the population data set
formatPopulation.SpatialPolygonsDataFrame	Format the population data set
getBreaks	Age Breaks
getRates	Calculate the estimated coefficients of age and sex group from the glm model
getSMR	Calculate the standardized mortality/morbility ratios
getSMR.data.frame	Calculate the standardized mortality/morbility ratios
getSMR.list	Calculate the standardized mortality/morbility ratios
getSMR.SpatialPolygonsDataFrame	Calculate the standardized mortality/morbility ratios
getStdRate	Calculate the standardized rate
mergeBugsData	merge the result from bugs function
mergeBugsData.data.frame	merge the result from bugs function
mergeBugsData.SpatialPolygonsDataFrame	merge the result from bugs function
popdata	Ontario 2006 population by census subdivision
referencepop	Standard Canadian population data set from year 1991.