onemap-package |
Software for constructing genetic maps in outcrossing species |
add.marker |
Add or Drop Markers From a Sequence |
add_drop |
Add or Drop Markers From a Sequence |
compare |
Compare all possible orders for a given sequence |
def.rf.3pts |
Three-point analysis of genetic markers |
drop.marker |
Add or Drop Markers From a Sequence |
example_out |
Data from a full-sib family derived from two outbred parents |
group |
Assign markers to linkage groups |
haldane |
Mapping functions Haldane and Kosambi |
kosambi |
Mapping functions Haldane and Kosambi |
make.seq |
Create a sequence of markers |
map |
Construct the linkage map for a sequence of markers |
map_func |
Mapping functions Haldane and Kosambi |
marker.type |
Type of segregation of markers |
onemap |
Software for constructing genetic maps in outcrossing species |
order.seq |
Search for the best order of markers combining compare and try.seq
functions |
print.group |
Assign markers to linkage groups |
print.rf.2pts |
Two-point analysis between genetic markers |
print.try |
Try to map a marker into every possible position between markers in a given sequence |
rcd |
Rapid Chain Delineation |
read.outcross |
Read data from a segregating full-sib population |
rf.2pts |
Two-point analysis between genetic markers |
rf.graph.table |
Plots a pairwise recombination fraction matrix using a color scale. |
ripple |
Compares and displays plausible alternative orders for a given linkage
map |
set.map.fun |
Defines the default mapping function |
try.seq |
Try to map a marker into every possible position between markers in a given sequence |