timereg package for Flexible regression models for survival data.


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Documentation for package ‘timereg’ version 1.3-0

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A B C D G K L M N P R S T

-- A --

aalen Fit additive hazards model
aalen.des For internal use
aalen.test Fit additive hazards model
aalenBase For internal use
aalenBaseTest For internal use
additive.compSs For internal use
additive.pls Fits PLS for additive hazards model
additive.plsR Fits PLS for additive hazards model

-- B --

bmt The Bone Marrow Transplant Data

-- C --

cd4 The multicenter AIDS cohort study
check.missing For internal use
coef.aalen For internal use
coef.comprisk For internal use
coef.cox.aalen For internal use
coef.dynreg For internal use
coef.timecox For internal use
coef.two.stage For internal use
coefBase For internal use
comp.risk Competings Risks Regression
const Identifies parametric terms of model
cox Identifies proportional excess terms of model
cox.aalen Fit Cox-Aalen survival model
cox.aalenBase For internal use
Cpred For internal use
csl CSL liver chirrosis data
Csmooth2B For internal use
CsmoothB For internal use
cum.residuals Model validation based on cumulative residuals

-- D --

des.aalen For internal use
diabetes The Diabetic Retinopathy Data
dynreg Fit time-varying regression model
dynregBase For internal use

-- G --

Gprop.odds Fit Generalized Semiparametric Proportional 0dds Model

-- K --

kernel For internal use
krylow.pls Fits Krylow based PLS for additive hazards model

-- L --

localTimeReg For internal use

-- M --

mela.pop Melanoma data and Danish population mortality by age and sex
melanoma The Melanoma Survival Data
my.lars For internal use
mycoef.lars Fits LASSO model for additive hazards model by Lars algorithm
mylars Fits LASSO model for additive hazards model by Lars algorithm
mypbc For internal use
myplot.lars For internal use
mypredict.lars Fits LASSO model for additive hazards model by Lars algorithm

-- N --

nameestimate For internal use
namematrix For internal use

-- P --

pava For internal use
pe.sasieni Fits Proportional excess hazards model with fixed offsets
percen For internal use
plot.aalen Plots estimates and test-processes
plot.comprisk For internal use
plot.cox.aalen Plots estimates and test-processes
plot.cox.aalen2 For internal use
plot.cum.residuals Plots cumulative residuals
plot.cums For internal use
plot.dynreg Plots estimates and test-processes
plot.predict For internal use
plot.predictAalen For internal use
plot.predictComprisk For internal use
plot.predictCoxAalen For internal use
plot.prop.excess Plots estimates and test-processes
plot.prop.excess2 For internal use
plot.score For internal use
plot.timecox Plots estimates and test-processes
plot.timecox2 For internal use
plot.two.stage For internal use
pls.surv.cv Fits PLS for additive hazards model
pred.cum For internal use
pred.des For internal use
predict.aalen Predictions for Survival and Competings Risks Regression
predict.comprisk Predictions for Survival and Competings Risks Regression
predict.cox.aalen Predictions for Survival and Competings Risks Regression
predict.pls For internal use
print.aalen Prints call
print.comprisk Prints call
print.cox.aalen Prints call
print.cum.residuals Prints call
print.dynreg Prints call
print.pe.sasieni For internal use
print.pls For internal use
print.predictAalen For internal use
print.predictComprisk For internal use
print.predictCoxAalen For internal use
print.prop.excess Prints call
print.timecox Prints call
print.two.stage For internal use
print.two.stage.reg For internal use
prop Identifies the multiplicative terms in Cox-Aalen model and proportional excess risk model
prop.excess Fits Proportional excess hazards model
prop.excessBase For internal use
prop.odds Fit Semiparametric Proportional 0dds Model
pval For internal use

-- R --

read-design For internal use
read.design For internal use
read.surv For internal use
rm.missing For internal use

-- S --

semiaalen For internal use
semiaalenTest For internal use
semicox For internal use
semiregBase For internal use
slaaop For internal use
sTRACE The TRACE study group of myocardial infarction
summary.aalen Prints summary statistics
summary.comprisk For internal use
summary.cox.aalen Prints summary statistics
summary.cum.residuals Prints summary statistics for goodness-of-fit tests based on cumulative residuals
summary.dynreg Prints summary statistics
summary.pe-sasieni Fits Proportional excess hazards model with fixed offsets
summary.pe.sasieni For internal use
summary.pls For internal use
summary.predictAalen For internal use
summary.predictComprisk For internal use
summary.predictCoxAalen For internal use
summary.prop.excess Prints summary statistics
summary.timecox Prints summary statistics
summary.two.stage For internal use
summary.two.stage.reg For internal use
surv.lars Fits LASSO model for additive hazards model by Lars algorithm
surv.lars.cv Fits LASSO model for additive hazards model by Lars algorithm

-- T --

timecox Fit Cox model with partly timevarying effects.
timecoxBase For internal use
timetest For internal use
TRACE The TRACE study group of myocardial infarction
tTRACE The TRACE study group of myocardial infarction
two.stage Fit Clayton-Oakes-Glidden Two-Stage model
two.stageBase For internal use
two.stageBase.reg For internal use