aldh2 {gap}R Documentation

ALDH2 markers and Alcoholism

Description

This data set contains eight ALDH2 markers and Japanese patients and controls.

Usage

data(aldh2)

Format

A data frame:

id
subject id
y
a variable taking value 0 for controls and 1 for Schizophrenia
D12S2070.a1
D12S2070 allele a1
D12S2070.a2
D12S2070 allele a2
D12S839.a1
D12S839 allele a1
D12S839.a2
D12S839 allele a2
D12S821.a1
D12S821 allele a1
D12S821.a2
D12S821 allele a2
D12S1344.a1
D12S1344 allele a1
D12S1344.a2
D12S1344 allele a2
EXON12.a1
EXON12 allele a1
EXON12.a2
EXON12 allele a2
EXON1.a1
EXON1 allele a1
EXON1.a2
EXON1 allele a2
D12S2263.a1
D12S2263 allele a1
D12S2263.a2
D12S2263 allele a2
D12S1341.a1
D12S1341 allele a1
D12S1341.a2
D12S1341 allele a2

There are genotypes for 8 loci, with a prefix name (e.g., "EXON12") and a suffix for each of two alleles (".a1" and ".a2").

The eight markers loci follows the following map (base pairs)

D12S2070 (> 450 000),
D12S839 (> 450 000),
D12S821 (~ 400 000),
D12S1344 ( 83 853),
EXON12 ( 0),
EXON1 ( 37 335),
D12S2263 ( 38 927),
D12S1341 (> 450 000)

Source

Prof Ian Craig of Oxford and SGDP Centre, KCL


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