beta.special |
Compute set of intervention effects |
beta.special.pcObj |
Compute set of intervention effects in a fast way |
binCItest |
Test for (conditional) independence for binary data |
compareGraphs |
Compare two graphs in terms of TPR, FPR and TDR |
condIndFisherZ |
Conditional Independence by Fisher's Z-Transformation |
corGraph |
Computing the correlation graph |
dag2cpdag |
Convert a DAG to a CPDAG |
disCItest |
Test for (conditional) independence for discrete data |
dsep |
Test for d-separation in a DAG |
dsepTest |
Test for d-separation in a DAG |
fci |
Estimate the equivalence class of a MAG (PAG) using the FCI Algorithm |
fciAlgo-class |
Class "fciAlgo" |
gaussCItest |
Test for (conditional) independence for gaussian data |
getNextSet |
Iteration through a list of all combinations of choose(n,k) |
gSquareBin |
Test for (conditional) independence for binary data |
gSquareDis |
Test for (conditional) independence for discrete data |
ida |
Estimate multiset of possible total causal effects
from observational data |
idaFast |
Estimate multiset of possible total causal effects for
several target variables at the same time. |
mcor |
Compute Correlation Matrix |
pc |
Estimate the equivalence class of a DAG
using the PC algorithm |
pcAlgo |
PC-Algorithm: Estimate the Underlying Graph (Skeleton) or
Equivalence Class (CPDAG) of a DAG |
pcAlgo-class |
Class "pcAlgo" |
pcorOrder |
Compute Partial Correlations |
pcSelect |
PC-Select: Estimate subgraph around a response variable |
pcSelect.presel |
PC-Select preselection: Estimate subgraph around a response variable using preselection |
pdag2dag |
Extend a Partially Directed Acyclic Graph (PDAG) to a DAG |
pdsep |
Compute possible d-sep for each node and test and adapt graph accordingly |
plot,fciAlgo-method |
Class "fciAlgo" |
plot,pcAlgo-method |
Class "pcAlgo" |
plotAG |
Plot partial ancestral graphs (PAG) |
plotSG |
Plot the subgraph around a Specific Node in a Graph Object |
qreach |
Compute possible d-sep of node x |
randomDAG |
Generate a Directed Acyclic Graph (DAG) randomly |
rmvDAG |
Generate Multivariate Data according to a DAG |
shd |
Compute Structural Hamming Distance (SHD) |
show,fciAlgo-method |
Class "fciAlgo" |
show,pcAlgo-method |
Class "pcAlgo" |
skeleton |
Estimate the skeleton of a DAG using the PC Algorithm |
summary,fciAlgo-method |
Class "fciAlgo" |
summary,pcAlgo-method |
Class "pcAlgo" |
udag2pag |
Extend a pcAlgo-object containing a skeleton to a PAG |
udag2pdag |
Extend a pcAlgo-object containing a skeleton to a PDAG |
udag2pdagRelaxed |
Extend a pcAlgo-object containing a skeleton to a PDAG |
udag2pdagSpecial |
Extend a pcAlgo-object containing a skeleton to a PDAG using
different methods if problems occur |
zStat |
Conditional Independence by Fisher's Z-Transformation |